Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf5797 family proteinHALXA_RS14680Not AvailablePositive2995680 - 299618919032.8
alpha/beta fold hydrolaseHALXA_RS14685Not AvailableNegative2996264 - 299724435621.5
hypothetical proteinHALXA_RS14690Not AvailablePositive2997400 - 299772311440.2
hypothetical proteinHALXA_RS14695Not AvailablePositive2997782 - 299886141099.9
methylmalonyl co-a mutase-associated gtpase meabHALXA_RS14700Not AvailableNegative2998898 - 300006740774.1
cobalamin b12-binding domain-containing proteinHALXA_RS14705Not AvailableNegative3000064 - 300048014726.3
hd domain-containing proteinHALXA_RS14710Not AvailablePositive3000760 - 300143125462.9
lyse family translocatorHALXA_RS14715Not AvailableNegative3001607 - 300230523533.1
mfs transporterHALXA_RS14720Not AvailableNegative3002396 - 300351138551.9
class i sam-dependent methyltransferaseHALXA_RS14725Not AvailableNegative3003687 - 300432823539.8

Displaying genes 3131 – 3140 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.