Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adenylosuccinate lyaseHALXA_RS14585Not AvailablePositive2978946 - 298034351449.1
eama family transporterHALXA_RS14590Not AvailablePositive2980471 - 298089314184.4
eama family transporterHALXA_RS14595Not AvailablePositive2980893 - 298130914768.0
m20 family metallopeptidaseHALXA_RS14600Not AvailableNegative2981335 - 298247139795.1
diaminopimelate decarboxylaseHALXA_RS14605Not AvailableNegative2982473 - 298372645437.7
hypothetical proteinHALXA_RS14610Not AvailableNegative2983808 - 298424816354.8
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseHALXA_RS14615Not AvailableNegative2984395 - 298523130176.7
4-hydroxy-tetrahydrodipicolinate reductaseHALXA_RS14620Not AvailableNegative2985314 - 298608127288.3
4-hydroxy-tetrahydrodipicolinate synthaseHALXA_RS14625Not AvailableNegative2986078 - 298700733085.5
m48 family metallopeptidaseHALXA_RS14630Not AvailablePositive2987486 - 298831930534.4

Displaying genes 3111 – 3120 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.