Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diacylglycerol/lipid kinase family proteinHALXA_RS14535Not AvailableNegative2968631 - 296961734255.2
php domain-containing proteinHALXA_RS22495Not AvailablePositive2969672 - 297039726326.9
lrp/asnc family transcriptional regulatorHALXA_RS14545Not AvailableNegative2970451 - 297086415622.4
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunitHALXA_RS14550Not AvailablePositive2970967 - 297204638853.5
duf5518 domain-containing proteinHALXA_RS14555Not AvailablePositive2972212 - 297265215873.3
thioredoxin reductaseHALXA_RS14560Not AvailableNegative2972797 - 297384337650.6
abc transporter substrate-binding proteinHALXA_RS14565Not AvailableNegative2973845 - 297508645821.0
simpl domain-containing proteinHALXA_RS14570Not AvailableNegative2975203 - 297597326652.8
cysteine synthase aHALXA_RS14575Not AvailablePositive2976124 - 297709533489.7
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseHALXA_RS14580Not AvailableNegative2977138 - 297876958631.8

Displaying genes 3101 – 3110 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.