Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metal-dependent hydrolaseHALXA_RS14385Not AvailableNegative2941336 - 294189620333.7
hvo_a0556 family zinc finger proteinHALXA_RS14390Not AvailablePositive2942005 - 29421846201.22
hypothetical proteinHALXA_RS14395Not AvailableNegative2942285 - 29424917149.8
hypothetical proteinHALXA_RS14400Not AvailableNegative2942496 - 29426967297.22
s1c family serine proteaseHALXA_RS14405Not AvailableNegative2943039 - 294415439040.3
trna pseudouridine(54/55) synthase pus10HALXA_RS14410Not AvailablePositive2944349 - 294570449703.0
alpha/beta hydrolase family proteinHALXA_RS14415Not AvailableNegative2945711 - 294793681406.2
ribonuclease hiiHALXA_RS14420Not AvailablePositive2948058 - 294875924544.2
preprotein translocase subunit secdHALXA_RS14425Not AvailableNegative2948967 - 295058057807.4
protein translocase subunit secfHALXA_RS14430Not AvailableNegative2950580 - 295145831286.0

Displaying genes 3071 – 3080 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.