Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methyl-accepting chemotaxis proteinHALXA_RS14340Not AvailablePositive2931612 - 293408988223.9
hypothetical proteinHALXA_RS14345Not AvailablePositive2934152 - 293453814812.0
ppox class f420-dependent oxidoreductaseHALXA_RS14350Not AvailablePositive2934624 - 293501915054.6
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseHALXA_RS14355Not AvailablePositive2935108 - 293576122131.9
bifunctional 2-dehydro-3-deoxygluconokinase/2-dehydro-3- deoxygalactonokinaseHALXA_RS14360Not AvailableNegative2935803 - 293676833811.0
galactonate dehydrataseHALXA_RS14365Not AvailableNegative2936895 - 293807643590.0
alpha-glucosidase/alpha-galactosidaseHALXA_RS14370Not AvailableNegative2938218 - 293952548262.7
hypothetical proteinHALXA_RS21715Not AvailableNegative2939598 - 294032328409.0
Trna-pseudoNot AvailableNot AvailablePositive2940447 - 2940519Not Available
trna (pseudouridine(54)-n(1))-methyltransferase trmyHALXA_RS14380Not AvailableNegative2940621 - 294122322110.6

Displaying genes 3061 – 3070 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.