Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
archaeosine synthase subunit alphaHALXA_RS14290Not AvailablePositive2917278 - 291902965504.9
hypothetical proteinHALXA_RS14295Not AvailableNegative2919051 - 29192456896.7
metal-dependent transcriptional regulatorHALXA_RS14300Not AvailablePositive2919515 - 291992515015.4
dna starvation/stationary phase protection protein dpsaHALXA_RS14305Not AvailableNegative2920297 - 292084220594.7
hded family acid-resistance proteinHALXA_RS14310Not AvailablePositive2921144 - 292174920348.2
llm class flavin-dependent oxidoreductaseHALXA_RS14315Not AvailablePositive2921844 - 292286336416.1
bacterio-opsin activator domain-containing proteinHALXA_RS14320Not AvailableNegative2922893 - 292465664838.6
response regulatorHALXA_RS14325Not AvailableNegative2924653 - 292511417465.4
pas domain-containing proteinHALXA_RS22170Not AvailableNegative2925107 - 2929159151450.0
abc transporter substrate-binding proteinHALXA_RS14335Not AvailablePositive2930371 - 293161542770.6

Displaying genes 3051 – 3060 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.