Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS22850Not AvailablePositive2907621 - 290798913211.0
duf4397 domain-containing proteinHALXA_RS22855Not AvailablePositive2908305 - 290912327917.9
padr family transcriptional regulatorHALXA_RS14250Not AvailableNegative2909704 - 290997910766.7
nudix hydrolaseHALXA_RS14255Not AvailablePositive2910162 - 291071620291.3
hypothetical proteinHALXA_RS14260Not AvailableNegative2910978 - 291202136244.4
hypothetical proteinHALXA_RS14265Not AvailableNegative2912480 - 291377846461.0
trna guanosine(15) transglycosylase tgtaHALXA_RS14270Not AvailablePositive2914149 - 291562454022.4
halod1 output domain-containing proteinHALXA_RS14275Not AvailableNegative2915740 - 291607811898.7
lrp/asnc family transcriptional regulatorHALXA_RS14280Not AvailableNegative2916253 - 291672617369.5
tram domain-containing proteinHALXA_RS14285Not AvailablePositive2916855 - 291721113068.7

Displaying genes 3041 – 3050 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.