Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
wd40/yvtn/bnr-like repeat-containing proteinHALXA_RS14195Not AvailableNegative2899041 - 290045648358.7
hypothetical proteinHALXA_RS14200Not AvailableNegative2900593 - 290088010409.1
sulfataseHALXA_RS14205Not AvailableNegative2900980 - 290247656328.6
sulfataseHALXA_RS14210Not AvailablePositive2902572 - 290394850950.5
hypothetical proteinHALXA_RS14215Not AvailablePositive2904074 - 290437010808.2
nucleoside hydrolaseHALXA_RS14220Not AvailableNegative2904403 - 290538334412.1
hypothetical proteinHALXA_RS14225Not AvailableNegative2905457 - 29056486386.34
carboxymuconolactone decarboxylase family proteinHALXA_RS14230Not AvailablePositive2905707 - 290606312590.5
trna pseudouridine(38-40) synthase truaHALXA_RS14235Not AvailablePositive2906151 - 290698730319.7
hypothetical proteinHALXA_RS14240Not AvailablePositive2907032 - 29072748394.49

Displaying genes 3031 – 3040 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.