Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS14095Not AvailableNegative2878116 - 287855615071.4
hypothetical proteinHALXA_RS14100Not AvailablePositive2879133 - 287984625929.1
hypothetical proteinHALXA_RS14105Not AvailablePositive2879958 - 288104037802.0
llm class oxidoreductaseHALXA_RS14110Not AvailableNegative2881105 - 288203134632.1
m42 family peptidaseHALXA_RS14115Not AvailableNegative2882134 - 288319236994.5
aconitate hydrataseHALXA_RS14120Not AvailableNegative2883404 - 288538071210.7
deoxyuridine 5'-triphosphate nucleotidohydrolaseHALXA_RS14125Not AvailablePositive2885713 - 288619517890.9
hypothetical proteinHALXA_RS14130Not AvailablePositive2886397 - 288695719825.1
copd family proteinHALXA_RS14135Not AvailablePositive2887068 - 288753216051.0
hypothetical proteinHALXA_RS14140Not AvailablePositive2887696 - 288813015748.4

Displaying genes 3011 – 3020 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.