Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shoct domain-containing proteinHALXA_RS14045Not AvailablePositive2868062 - 286848715256.2
mbl fold metallo-hydrolaseHALXA_RS14050Not AvailablePositive2868576 - 286981445200.9
hypothetical proteinHALXA_RS14055Not AvailablePositive2869875 - 287029714198.6
hypothetical proteinHALXA_RS14060Not AvailablePositive2870432 - 287087816922.9
n-methyl-l-tryptophan oxidaseHALXA_RS14065Not AvailablePositive2870950 - 287208342080.7
duf5305 domain-containing proteinHALXA_RS14070Not AvailableNegative2872099 - 287358652379.1
s26 family signal peptidaseHALXA_RS14075Not AvailableNegative2873588 - 287476641993.0
duf1102 domain-containing proteinHALXA_RS14080Not AvailableNegative2874897 - 287625846763.2
hypothetical proteinHALXA_RS14085Not AvailableNegative2876380 - 287678115046.7
duf1102 domain-containing proteinHALXA_RS14090Not AvailableNegative2877547 - 287811319467.7

Displaying genes 3001 – 3010 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.