Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS13745Not AvailablePositive2812358 - 281278314968.8
tigr00341 family proteinHALXA_RS13750Not AvailablePositive2812905 - 281426047088.7
hypothetical proteinHALXA_RS13755Not AvailableNegative2814268 - 28144656283.27
fad-binding oxidoreductaseHALXA_RS13760Not AvailablePositive2814734 - 281616751670.8
geranylgeranyl reductase family proteinHALXA_RS13765Not AvailableNegative2816170 - 281726139904.7
hypothetical proteinHALXA_RS13770Not AvailableNegative2817346 - 28175557053.72
gtp-dependent dephospho-coa kinase family proteinHALXA_RS13775Not AvailableNegative2817646 - 281823621483.9
transcription elongation factor subunit spt4HALXA_RS13780Not AvailableNegative2818333 - 28185307201.26
dna-directed rna polymeraseHALXA_RS13785Not AvailableNegative2818533 - 281911121164.7
pin domain-containing proteinHALXA_RS13790Not AvailableNegative2819112 - 281953415128.9

Displaying genes 2941 – 2950 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.