Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ump kinaseHALXA_RS13695Not AvailablePositive2801801 - 280255025990.1
lysine--trna ligaseHALXA_RS13700Not AvailablePositive2802553 - 280427164695.2
site-2 protease family proteinHALXA_RS13705Not AvailablePositive2804354 - 280620164106.9
padr family transcriptional regulatorHALXA_RS13710Not AvailableNegative2806310 - 280683421023.2
heme-binding proteinHALXA_RS13715Not AvailablePositive2807012 - 280856558120.5
hypothetical proteinHALXA_RS13720Not AvailableNegative2808671 - 28088596708.02
duf5611 family proteinHALXA_RS13725Not AvailableNegative2809038 - 280942714645.9
hypothetical proteinHALXA_RS13730Not AvailableNegative2809517 - 281059036588.4
duf6432 family proteinHALXA_RS13735Not AvailablePositive2810809 - 281110811188.9
aminomethyltransferase family proteinHALXA_RS13740Not AvailablePositive2811164 - 281227940306.7

Displaying genes 2931 – 2940 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.