Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
doxx family proteinHALXA_RS13645Not AvailableNegative2792888 - 279342119587.2
histidine--trna ligaseHALXA_RS13650Not AvailableNegative2793637 - 279493548096.3
alpha hydrolaseHALXA_RS13655Not AvailableNegative2795081 - 279568021941.3
dna-binding proteinHALXA_RS13660Not AvailableNegative2795680 - 279603013533.0
30s ribosomal protein s19eHALXA_RS13665Not AvailableNegative2796128 - 279658316830.4
thiamine-phosphate kinaseHALXA_RS13670Not AvailablePositive2796715 - 279761731544.2
site-2 protease family proteinHALXA_RS13675Not AvailableNegative2797678 - 279883241668.0
hypothetical proteinHALXA_RS13680Not AvailableNegative2799150 - 27993959227.89
molybdopterin synthaseHALXA_RS13685Not AvailableNegative2799646 - 280049730444.1
capa family proteinHALXA_RS13690Not AvailablePositive2800637 - 280167137980.1

Displaying genes 2921 – 2930 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.