Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
marr family transcriptional regulatorHALXA_RS13545Not AvailablePositive2776336 - 277662910825.6
hypothetical proteinHALXA_RS13550Not AvailablePositive2776707 - 277712015496.9
nad+ synthaseHALXA_RS13555Not AvailableNegative2777146 - 277806332629.1
hypothetical proteinHALXA_RS13560Not AvailablePositive2778280 - 277904728321.8
pinc/vapc family atpaseHALXA_RS13565Not AvailableNegative2779083 - 278095767664.0
helix-turn-helix transcriptional regulatorHALXA_RS13570Not AvailableNegative2781004 - 278183730195.8
m20 family metallopeptidaseHALXA_RS13575Not AvailablePositive2782341 - 278342338020.6
hypothetical proteinHALXA_RS13580Not AvailableNegative2783436 - 27837179765.51
hypothetical proteinHALXA_RS13585Not AvailableNegative2783851 - 278420712087.5
carboxypeptidase m32HALXA_RS13590Not AvailablePositive2784449 - 278598758461.1

Displaying genes 2901 – 2910 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.