Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycerophosphodiester phosphodiesteraseHALXA_RS13495Not AvailablePositive2767398 - 276827931508.6
response regulatorHALXA_RS13500Not AvailablePositive2768320 - 276881718314.0
tigr01548 family had-type hydrolaseHALXA_RS13505Not AvailableNegative2768824 - 276969932379.4
hypothetical proteinHALXA_RS13510Not AvailableNegative2769813 - 277036420523.8
upf0146 family proteinHALXA_RS13515Not AvailableNegative2770445 - 277084914798.5
archaemetzincin family zn-dependent metalloproteaseHALXA_RS13520Not AvailablePositive2770889 - 277141019234.4
class i sam-dependent methyltransferaseHALXA_RS13525Not AvailablePositive2771478 - 277217025054.8
ribosome biogenesis/translation initiation atpase rliHALXA_RS13530Not AvailableNegative2772230 - 277404467570.8
hypothetical proteinHALXA_RS13535Not AvailableNegative2774048 - 277436811392.8
long-chain-fatty-acid--coa ligaseHALXA_RS13540Not AvailablePositive2774558 - 277616560061.3

Displaying genes 2891 – 2900 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.