Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseHALXA_RS00780Not AvailablePositive150034 - 15086128586.4
abc transporter permeaseHALXA_RS00785Not AvailableNegative150891 - 15174229742.5
abc transporter atp-binding proteinHALXA_RS00790Not AvailableNegative151735 - 15250228177.4
abc transporter substrate-binding proteinHALXA_RS00795Not AvailableNegative152499 - 15386649037.0
hypothetical proteinHALXA_RS00800Not AvailablePositive154189 - 15510933457.1
pyrroloquinoline quinone-dependent dehydrogenaseHALXA_RS00805Not AvailablePositive155115 - 15682462922.7
plastocyanin/azurin family copper-binding proteinHALXA_RS00810Not AvailablePositive156852 - 15835753011.3
glcg/hbps family heme-binding proteinHALXA_RS00815Not AvailableNegative158510 - 15892914628.0
glutathione-independent formaldehyde dehydrogenaseHALXA_RS00820Not AvailablePositive159126 - 16028641832.8
atp-binding proteinHALXA_RS20890Not AvailableNegative160317 - 16248279847.7

Displaying genes 281 – 290 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.