Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf5518 domain-containing proteinHALXA_RS13445Not AvailablePositive2761200 - 276161012668.8
four-helix bundle copper-binding proteinHALXA_RS13450Not AvailableNegative2761773 - 276212012794.9
phosphoribosyl-atp diphosphataseHALXA_RS13455Not AvailableNegative2762235 - 276251910651.3
bifunctional nuclease family proteinHALXA_RS13460Not AvailableNegative2762520 - 276298716756.4
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtHALXA_RS13465Not AvailableNegative2763102 - 276378823815.5
preprotein translocase subunit sec61betaHALXA_RS13470Not AvailableNegative2763972 - 27641335540.78
thioredoxin family proteinHALXA_RS13475Not AvailablePositive2764275 - 276457711606.5
nadph-dependent f420 reductaseHALXA_RS13480Not AvailableNegative2764698 - 276536623419.4
hypothetical proteinHALXA_RS13485Not AvailableNegative2765470 - 276684649730.1
hypothetical proteinHALXA_RS13490Not AvailableNegative2767047 - 27673049654.96

Displaying genes 2881 – 2890 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.