Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nudix domain-containing proteinHALXA_RS13395Not AvailablePositive2752517 - 275393850241.2
d-2-hydroxyacid dehydrogenaseHALXA_RS13400Not AvailablePositive2754136 - 275507134059.5
gnat family n-acetyltransferaseHALXA_RS13405Not AvailablePositive2755073 - 275565721122.4
nudix hydrolaseHALXA_RS13410Not AvailablePositive2755718 - 275618517098.6
grpb family proteinHALXA_RS13415Not AvailableNegative2756243 - 275679421318.8
putative zinc-binding proteinHALXA_RS13420Not AvailableNegative2756885 - 275726813712.8
gtp-binding protein engbHALXA_RS13425Not AvailableNegative2757612 - 275822923575.8
tigr00341 family proteinHALXA_RS13430Not AvailablePositive2758403 - 275969546124.2
hypothetical proteinHALXA_RS13435Not AvailableNegative2759728 - 276007212027.5
nog1 family proteinHALXA_RS13440Not AvailableNegative2760122 - 276111737086.2

Displaying genes 2871 – 2880 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.