Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aaa family atpaseHALXA_RS13340Not AvailableNegative2742876 - 274390737815.5
cold-shock proteinHALXA_RS13350Not AvailableNegative2744221 - 27444157103.96
hypothetical proteinHALXA_RS13355Not AvailableNegative2744529 - 274483411161.9
hypothetical proteinHALXA_RS13360Not AvailablePositive2744992 - 27451926743.37
5,10-methylenetetrahydromethanopterin reductaseHALXA_RS13365Not AvailableNegative2745246 - 274627436307.9
class i sam-dependent methyltransferaseHALXA_RS13370Not AvailableNegative2746433 - 274724529511.9
coenzyme f420-0:l-glutamate ligaseHALXA_RS13375Not AvailableNegative2747296 - 274807228086.6
hydantoinase b/oxoprolinase family proteinHALXA_RS13380Not AvailableNegative2748145 - 274983659509.7
hydantoinase/oxoprolinase family proteinHALXA_RS13385Not AvailableNegative2749833 - 275188171804.0
hypothetical proteinHALXA_RS13390Not AvailableNegative2751953 - 275244017724.5

Displaying genes 2861 – 2870 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.