Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS13250Not AvailableNegative2725986 - 27262077786.74
16s ribosomal rnaNot AvailableNot AvailablePositive2727386 - 2728856Not Available
Trna-alaNot AvailableNot AvailablePositive2728994 - 2729065Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive2729290 - 2732206Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive2732333 - 2732454Not Available
Trna-cysNot AvailableNot AvailablePositive2732595 - 2732670Not Available
Trna-lysNot AvailableNot AvailablePositive2732900 - 2732973Not Available
hypothetical proteinHALXA_RS13285Not AvailableNegative2733051 - 273375225029.9
hypothetical proteinHALXA_RS22165Not AvailableNegative2733867 - 27340255839.34
duf6360 family proteinHALXA_RS13290Not AvailablePositive2734684 - 273499511414.9

Displaying genes 2841 – 2850 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.