Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS13200Not AvailablePositive2717155 - 271746311337.0
pyridoxal-phosphate-dependent aminotransferase family proteinHALXA_RS13205Not AvailableNegative2717512 - 271872343326.7
metal-dependent hydrolaseHALXA_RS13210Not AvailablePositive2718888 - 271988633903.7
hypothetical proteinHALXA_RS13215Not AvailablePositive2719965 - 272063623287.3
hypothetical proteinHALXA_RS13220Not AvailablePositive2720629 - 272128823825.0
dodecinHALXA_RS13225Not AvailablePositive2721350 - 27215507377.43
hesb/isca family proteinHALXA_RS13230Not AvailableNegative2721814 - 272219413566.2
hypothetical proteinHALXA_RS13235Not AvailableNegative2722332 - 27225538609.08
methyl-accepting chemotaxis proteinHALXA_RS13240Not AvailableNegative2722666 - 272453165772.5
histidinol dehydrogenaseHALXA_RS13245Not AvailableNegative2724650 - 272593645178.0

Displaying genes 2831 – 2840 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.