Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gfo/idh/moca family proteinHALXA_RS13150Not AvailableNegative2706546 - 270763440539.9
abc transporter atp-binding proteinHALXA_RS13155Not AvailableNegative2707832 - 270901943479.3
carbohydrate abc transporter permeaseHALXA_RS13160Not AvailableNegative2709026 - 271010839391.6
carbohydrate abc transporter permeaseHALXA_RS13165Not AvailableNegative2710108 - 271114537580.3
extracellular solute-binding proteinHALXA_RS13170Not AvailableNegative2711135 - 271261052637.6
hth-type sugar sensing transcriptional regulator trmbHALXA_RS13175Not AvailableNegative2713128 - 271419238971.5
mechanosensitive ion channel family proteinHALXA_RS13180Not AvailablePositive2714517 - 271557839196.6
universal stress proteinHALXA_RS13185Not AvailablePositive2715663 - 271610015154.4
universal stress proteinHALXA_RS13190Not AvailableNegative2716122 - 271653215573.7
duf5816 domain-containing proteinHALXA_RS13195Not AvailablePositive2716702 - 27169419011.24

Displaying genes 2821 – 2830 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.