Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydropteroate synthaseHALXA_RS13095Not AvailablePositive2696033 - 269722343341.2
6-hydroxymethylpterin diphosphokinase mpte-like proteinHALXA_RS13100Not AvailablePositive2697476 - 269817425562.7
hypothetical proteinHALXA_RS13105Not AvailableNegative2698217 - 26984177406.77
tigr04024 family llm class f420-dependent oxidoreductaseHALXA_RS13110Not AvailableNegative2698555 - 269956536524.9
tubulin/ftsz family proteinHALXA_RS13120Not AvailableNegative2699869 - 270102641059.9
abc transporter substrate-binding proteinHALXA_RS13125Not AvailablePositive2701407 - 270317064960.3
phosphatase pap2 family proteinHALXA_RS13130Not AvailablePositive2703255 - 270413032538.7
cryptochrome/photolyase family proteinHALXA_RS13135Not AvailablePositive2704255 - 270568553358.4
halod1 output domain-containing proteinHALXA_RS13140Not AvailablePositive2705763 - 270606810751.1
carboxypeptidase-like regulatory domain-containing proteinHALXA_RS13145Not AvailableNegative2706078 - 270639211266.6

Displaying genes 2811 – 2820 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.