Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heme abc transporter atp-binding proteinHALXA_RS13045Not AvailablePositive2683580 - 268490246649.5
abc transporter substrate-binding proteinHALXA_RS13050Not AvailablePositive2685122 - 268634545657.2
glu-trna(gln) amidotransferase subunit gateHALXA_RS13055Not AvailablePositive2686411 - 268828567996.5
hypothetical proteinHALXA_RS13060Not AvailableNegative2688357 - 268873113136.9
lrp/asnc family transcriptional regulatorHALXA_RS13065Not AvailableNegative2688788 - 268927018233.2
dmt family transporterHALXA_RS13070Not AvailablePositive2689450 - 269048135827.7
mfs transporterHALXA_RS13075Not AvailablePositive2690531 - 269170639991.6
hypothetical proteinHALXA_RS13080Not AvailableNegative2691741 - 269283837582.7
rna methyltransferaseHALXA_RS13085Not AvailableNegative2692935 - 269374430053.8
cdc6/cdc18 family proteinHALXA_RS13090Not AvailablePositive2694659 - 269593047490.9

Displaying genes 2801 – 2810 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.