Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nifu family proteinHALXA_RS12995Not AvailableNegative2672045 - 267238311727.5
hypothetical proteinHALXA_RS13000Not AvailablePositive2672536 - 267307218295.3
meds domain-containing proteinHALXA_RS13005Not AvailableNegative2673117 - 267507273318.5
pas domain s-box proteinHALXA_RS13010Not AvailableNegative2675206 - 267784298751.0
cysteine--trna ligaseHALXA_RS13015Not AvailablePositive2677977 - 267947356223.9
presenilin family intramembrane aspartyl protease pshHALXA_RS13020Not AvailableNegative2679595 - 268056633480.2
h/aca ribonucleoprotein complex subunit gar1HALXA_RS13025Not AvailableNegative2680663 - 26809178888.32
signal recognition particle subunit srp19HALXA_RS13030Not AvailableNegative2680919 - 268120010410.2
pgf-cterm-anchored abc transporter substrate-binding proteinHALXA_RS13035Not AvailableNegative2681290 - 268251042526.9
vitamin b12 abc transporter permease btucHALXA_RS13040Not AvailablePositive2682570 - 268358334386.8

Displaying genes 2791 – 2800 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.