Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS00730Not AvailableNegative140329 - 14091922841.4
formate dehydrogenase subunit alphaHALXA_RS00735Not AvailablePositive141157 - 14329279437.8
cold-shock proteinHALXA_RS00740Not AvailableNegative143409 - 1436037088.95
voc family proteinHALXA_RS00745Not AvailableNegative143805 - 14423316364.7
abc transporter substrate-binding proteinHALXA_RS00750Not AvailableNegative144235 - 14523936486.4
abc transporter substrate-binding proteinHALXA_RS00755Not AvailableNegative145236 - 14623137341.6
abc transporter substrate-binding proteinHALXA_RS00760Not AvailableNegative146245 - 14714733943.5
cupin domain-containing proteinHALXA_RS00765Not AvailablePositive147293 - 14763112197.0
hypothetical proteinHALXA_RS00770Not AvailableNegative147649 - 14857534025.1
abc transporter substrate-binding proteinHALXA_RS00775Not AvailablePositive148834 - 15000041186.5

Displaying genes 271 – 280 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.