Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hvo_2901 family zinc finger proteinHALXA_RS12945Not AvailableNegative2661738 - 26619718781.0
class ii fumarate hydrataseHALXA_RS12950Not AvailableNegative2662228 - 266363750930.2
abc transporter substrate-binding proteinHALXA_RS12955Not AvailablePositive2663888 - 266522247154.0
carbohydrate abc transporter permeaseHALXA_RS12960Not AvailablePositive2665244 - 266621536342.6
carbohydrate abc transporter permeaseHALXA_RS12965Not AvailablePositive2666212 - 266714134248.0
abc transporter atp-binding proteinHALXA_RS12970Not AvailablePositive2667182 - 266837843719.9
duf4013 domain-containing proteinHALXA_RS12975Not AvailableNegative2668595 - 266933524798.0
ph domain-containing proteinHALXA_RS12980Not AvailableNegative2669455 - 267115861812.7
ph domain-containing proteinHALXA_RS12985Not AvailableNegative2671169 - 267163016480.1
bola family proteinHALXA_RS12990Not AvailableNegative2671714 - 26719689446.6

Displaying genes 2781 – 2790 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.