Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS12840Not AvailablePositive2640012 - 264091131650.7
dna-directed rna polymerase subunit lHALXA_RS12845Not AvailableNegative2640975 - 264126810526.1
rhomboid family intramembrane serine proteaseHALXA_RS12850Not AvailablePositive2641431 - 264329966548.7
abc transporter atp-binding proteinHALXA_RS12855Not AvailablePositive2643650 - 264446828759.6
abc transporter permeaseHALXA_RS12860Not AvailablePositive2644458 - 264580745285.0
abc transporter permeaseHALXA_RS12865Not AvailablePositive2645804 - 264703642515.4
mettl5 family proteinHALXA_RS12870Not AvailableNegative2647094 - 264771122246.8
hypothetical proteinHALXA_RS12875Not AvailableNegative2647724 - 264812213985.1
hypothetical proteinHALXA_RS12880Not AvailablePositive2648285 - 26484526387.23
hypothetical proteinHALXA_RS12885Not AvailableNegative2648673 - 264968937002.8

Displaying genes 2761 – 2770 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.