Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix transcriptional regulatorHALXA_RS12740Not AvailableNegative2619325 - 261967513080.1
nrde family proteinHALXA_RS12745Not AvailableNegative2619748 - 262054228097.9
o-succinylbenzoate--coa ligaseHALXA_RS12750Not AvailableNegative2620601 - 262219957188.5
mandelate racemase/muconate lactonizing enzyme family proteinHALXA_RS12755Not AvailableNegative2622223 - 262333839174.6
1,4-dihydroxy-2-naphthoate polyprenyltransferaseHALXA_RS12760Not AvailableNegative2623335 - 262427032789.1
hypothetical proteinHALXA_RS12765Not AvailableNegative2624345 - 262564947054.9
tat pathway signal proteinHALXA_RS12770Not AvailableNegative2625707 - 262703848589.6
1,4-dihydroxy-2-naphthoyl-coa synthaseHALXA_RS12775Not AvailableNegative2627170 - 262806033153.5
right-handed parallel beta-helix repeat-containing proteinHALXA_RS12780Not AvailableNegative2628488 - 262989748465.2
amphi-trp domain-containing proteinHALXA_RS12785Not AvailablePositive2630131 - 263043611356.8

Displaying genes 2741 – 2750 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.