Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix domain-containing proteinHALXA_RS12690Not AvailableNegative2611596 - 261227024850.1
duf2249 domain-containing proteinHALXA_RS12695Not AvailablePositive2612405 - 26126298437.87
duf2249 domain-containing proteinHALXA_RS12700Not AvailablePositive2612717 - 26129508942.33
duf2249 domain-containing proteinHALXA_RS12705Not AvailablePositive2613036 - 261331110272.0
alpha/beta fold hydrolaseHALXA_RS12710Not AvailableNegative2613368 - 261428234111.0
copper-containing nitrite reductaseHALXA_RS12715Not AvailablePositive2614445 - 261555439722.8
transcription initiation factor iibHALXA_RS12720Not AvailableNegative2615986 - 261696336220.9
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcHALXA_RS12725Not AvailablePositive2617165 - 261744310518.7
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataHALXA_RS12730Not AvailablePositive2617446 - 261871744137.0
hypothetical proteinHALXA_RS12735Not AvailablePositive2618809 - 261922515919.5

Displaying genes 2731 – 2740 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.