Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l1HALXA_RS12540Not AvailablePositive2582266 - 258289822990.6
50s ribosomal protein l10HALXA_RS12545Not AvailablePositive2582900 - 258395237036.0
50s ribosomal protein p1HALXA_RS12550Not AvailablePositive2583977 - 258432711663.6
lycopene cyclase domain-containing proteinHALXA_RS12555Not AvailablePositive2584554 - 258545933825.4
brp/blh family beta-carotene 15,15'-dioxygenaseHALXA_RS12560Not AvailablePositive2585449 - 258651036450.6
tripartite tricarboxylate transporter permeaseHALXA_RS12565Not AvailablePositive2586568 - 258783942416.4
btpa/sgcq family proteinHALXA_RS12570Not AvailableNegative2587861 - 258869428237.0
nadh:flavin oxidoreductase/nadh oxidaseHALXA_RS12575Not AvailablePositive2588871 - 258998340301.8
thioredoxin family proteinHALXA_RS12580Not AvailableNegative2590053 - 259061620997.8
hypothetical proteinHALXA_RS12585Not AvailablePositive2590754 - 259135321657.5

Displaying genes 2701 – 2710 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.