Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shoct domain-containing proteinHALXA_RS12495Not AvailableNegative2574682 - 257513116010.4
hypothetical proteinHALXA_RS12500Not AvailablePositive2575254 - 257571818190.1
rubrerythrin-like domain-containing proteinHALXA_RS22820Not AvailableNegative2575817 - 25759575274.0
hypothetical proteinHALXA_RS12505Not AvailableNegative2576297 - 25764796724.59
mfs transporterHALXA_RS12510Not AvailablePositive2576679 - 257791742550.6
phosphoenolpyruvate carboxykinase (atp)HALXA_RS12515Not AvailablePositive2578225 - 257973655649.2
hewd family proteinHALXA_RS12520Not AvailablePositive2579869 - 25800637362.19
divalent-cation tolerance protein cutaHALXA_RS12525Not AvailablePositive2580161 - 258047211783.4
50s ribosomal protein l11HALXA_RS12530Not AvailablePositive2580604 - 258108016692.1
hypothetical proteinHALXA_RS12535Not AvailableNegative2581371 - 258197919862.5

Displaying genes 2691 – 2700 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.