Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metal-dependent hydrolaseHALXA_RS22155Not AvailablePositive2566281 - 256686820070.6
gnat family n-acetyltransferaseHALXA_RS22160Not AvailablePositive2566970 - 256756022301.1
cdp-alcohol phosphatidyltransferase family proteinHALXA_RS12455Not AvailablePositive2567689 - 256838124525.6
ceha/mcba family metallohydrolaseHALXA_RS12460Not AvailablePositive2568378 - 256927731502.8
zn-dependent proteaseHALXA_RS12465Not AvailableNegative2569288 - 256991422552.1
trab/gumn family proteinHALXA_RS12470Not AvailableNegative2569911 - 257168662222.0
acyl-coa thioesteraseHALXA_RS12475Not AvailablePositive2571836 - 257231217845.6
s66 peptidase family proteinHALXA_RS12480Not AvailableNegative2572379 - 257343139067.3
ymgg-like glycine zipper-containing proteinHALXA_RS12485Not AvailableNegative2573540 - 25737496923.3
had-iia family hydrolaseHALXA_RS12490Not AvailableNegative2573827 - 257460927175.4

Displaying genes 2681 – 2690 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.