Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS12300Not AvailablePositive2534839 - 253567831518.1
hypothetical proteinHALXA_RS12305Not AvailableNegative2535941 - 253688232493.4
helix-turn-helix domain-containing proteinHALXA_RS12310Not AvailableNegative2537151 - 253781924458.2
abc transporter permeaseHALXA_RS12315Not AvailableNegative2537933 - 253876628716.9
extracellular solute-binding proteinHALXA_RS12320Not AvailableNegative2538763 - 253978236071.7
molybdopterin-guanine dinucleotide biosynthesis protein bHALXA_RS12325Not AvailableNegative2539929 - 254048920085.5
molecular chaperoneHALXA_RS12330Not AvailableNegative2540554 - 254139630845.1
4fe-4s dicluster domain-containing proteinHALXA_RS12335Not AvailableNegative2541424 - 254261745887.1
molybdopterin-dependent oxidoreductaseHALXA_RS12340Not AvailableNegative2542635 - 2546201134446.0
p-loop ntpaseHALXA_RS12345Not AvailableNegative2546476 - 254777745226.5

Displaying genes 2651 – 2660 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.