Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna sulfurtransferaseHALXA_RS12255Not AvailableNegative2525352 - 252653042617.0
mfs transporterHALXA_RS12260Not AvailableNegative2526639 - 252789542810.8
methionine adenosyltransferaseHALXA_RS12265Not AvailableNegative2528047 - 252925243497.3
class iv adenylate cyclaseHALXA_RS12270Not AvailableNegative2529346 - 252998423543.6
fkbp-type peptidyl-prolyl cis-trans isomeraseHALXA_RS12275Not AvailablePositive2530090 - 253107335941.3
hypothetical proteinHALXA_RS22375Not AvailablePositive2531192 - 25313324814.55
hypothetical proteinHALXA_RS12280Not AvailablePositive2531381 - 253219930034.5
rad55 family atpaseHALXA_RS12285Not AvailableNegative2532254 - 253288022593.6
aspartate carbamoyltransferaseHALXA_RS12290Not AvailablePositive2533117 - 253405834458.5
aspartate carbamoyltransferase regulatory subunitHALXA_RS12295Not AvailablePositive2534051 - 253454217922.0

Displaying genes 2641 – 2650 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.