Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
winged helix-turn-helix domain-containing proteinHALXA_RS12205Not AvailableNegative2514442 - 251480713390.5
cob(i)yrinic acid a,c-diamide adenosyltransferaseHALXA_RS12210Not AvailablePositive2514945 - 251572127605.8
abc transporter atp-binding proteinHALXA_RS12215Not AvailablePositive2515866 - 251663327976.9
hypothetical proteinHALXA_RS12220Not AvailablePositive2516630 - 251812050846.0
iron transporterHALXA_RS12225Not AvailablePositive2518721 - 251982439274.1
duf2243 domain-containing proteinHALXA_RS12230Not AvailableNegative2519847 - 252034117802.6
cobyric acid synthaseHALXA_RS12235Not AvailablePositive2520488 - 252213157463.1
copg family transcriptional regulatorHALXA_RS12240Not AvailableNegative2522222 - 252261114796.0
mth865 family proteinHALXA_RS12245Not AvailablePositive2522834 - 25230859043.49
bacterio-opsin activator domain-containing proteinHALXA_RS12250Not AvailablePositive2523228 - 252530075670.5

Displaying genes 2631 – 2640 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.