Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mrp/nbp35 family atp-binding proteinHALXA_RS12160Not AvailableNegative2506696 - 250776937859.2
hypothetical proteinHALXA_RS12165Not AvailableNegative2507967 - 250830212271.0
duf5783 family proteinHALXA_RS12170Not AvailablePositive2508394 - 250872912818.5
translation initiation factor eif-2bHALXA_RS12175Not AvailablePositive2508806 - 250965731013.1
thua domain-containing proteinHALXA_RS12180Not AvailableNegative2509668 - 251037226901.2
gfo/idh/moca family proteinHALXA_RS12185Not AvailablePositive2510670 - 251178540133.2
archaeal proteasome endopeptidase complex subunit betaHALXA_RS12190Not AvailableNegative2512015 - 251274625802.7
hypothetical proteinHALXA_RS22145Not AvailableNegative2512963 - 25131336147.64
duf555 domain-containing proteinHALXA_RS12195Not AvailablePositive2513451 - 251380412361.4
cbs domain-containing proteinHALXA_RS12200Not AvailablePositive2513881 - 251442019530.8

Displaying genes 2621 – 2630 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.