Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gnat family n-acetyltransferaseHALXA_RS12060Not AvailableNegative2487130 - 248766019344.3
cyclic nucleotide-binding/cbs domain-containing proteinHALXA_RS12065Not AvailableNegative2487810 - 248844522192.6
gtp cyclohydrolase iiiHALXA_RS12070Not AvailableNegative2488535 - 248929928288.7
duf5785 family proteinHALXA_RS12075Not AvailableNegative2489422 - 248974812643.5
gamma-glutamyltransferaseHALXA_RS12080Not AvailablePositive2490051 - 249197368972.1
hypothetical proteinHALXA_RS12085Not AvailableNegative2492054 - 249412373948.7
succinyl-coa:mesaconate coa-transferaseHALXA_RS12090Not AvailableNegative2494329 - 249550143000.8
methylaspartate mutase subunit sHALXA_RS12095Not AvailablePositive2495638 - 249609316093.5
methylaspartate mutase subunit eHALXA_RS12100Not AvailablePositive2496100 - 249755753443.6
methylaspartate ammonia-lyaseHALXA_RS12105Not AvailablePositive2497557 - 249885546756.1

Displaying genes 2601 – 2610 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.