Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endonuclease nucsHALXA_RS00635Not AvailablePositive124025 - 12476827099.7
ybhb/ybcl family raf kinase inhibitor-like proteinHALXA_RS00640Not AvailableNegative124957 - 12541216958.8
gnat family n-acetyltransferaseHALXA_RS00645Not AvailablePositive125697 - 12622119969.4
dna mismatch repair protein mutsHALXA_RS00650Not AvailableNegative126245 - 129037101755.0
helix-turn-helix domain-containing proteinHALXA_RS00655Not AvailablePositive129203 - 13078654152.7
chy zinc finger proteinHALXA_RS00660Not AvailableNegative130817 - 13114612488.5
gas vesicle protein gvpo, halophile-typeHALXA_RS22630Not AvailableNegative131303 - 13187521184.4
gas vesicle protein gvpnHALXA_RS00670Not AvailableNegative131931 - 13296837721.5
gas vesicle protein gvpaHALXA_RS00675Not AvailableNegative132974 - 13326110456.3
gvpl/gvpf family gas vesicle proteinHALXA_RS00680Not AvailablePositive133690 - 13431923593.3

Displaying genes 251 – 260 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.