Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine hydroxymethyltransferaseHALXA_RS11960Not AvailableNegative2467605 - 246885244755.1
hypothetical proteinHALXA_RS11965Not AvailablePositive2469035 - 247133284233.6
transcriptional regulator tbspHALXA_RS11970Not AvailablePositive2471715 - 247253329700.7
rnase p subunit p30 family proteinHALXA_RS11975Not AvailablePositive2472828 - 247353225695.9
class i sam-dependent methyltransferaseHALXA_RS11980Not AvailablePositive2473516 - 247416023277.6
rpp14/pop5 family proteinHALXA_RS11985Not AvailablePositive2474157 - 247466018506.7
archaeal proteasome endopeptidase complex subunit alphaHALXA_RS11990Not AvailablePositive2474665 - 247542927831.9
ribosome assembly factor sbdsHALXA_RS11995Not AvailablePositive2475710 - 247643527001.3
fun14 domain-containing proteinHALXA_RS12000Not AvailableNegative2476517 - 247683110723.2
gtpase hflxHALXA_RS12005Not AvailablePositive2477239 - 247854048612.7

Displaying genes 2581 – 2590 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.