Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bacterio-opsin activator domain-containing proteinHALXA_RS11770Not AvailableNegative2426510 - 2429824118818.0
universal stress proteinHALXA_RS11775Not AvailableNegative2430042 - 243046114790.2
hypothetical proteinHALXA_RS22685Not AvailableNegative2430553 - 24306844701.55
cytochrome c biogenesis protein ccdaHALXA_RS11780Not AvailableNegative2430761 - 243143522649.3
tlpa family protein disulfide reductaseHALXA_RS11785Not AvailableNegative2431437 - 243200919997.7
sco family proteinHALXA_RS11790Not AvailableNegative2432016 - 243285229697.6
hypothetical proteinHALXA_RS22135Not AvailablePositive2433158 - 24333316053.99
aminopeptidase p family proteinHALXA_RS11795Not AvailableNegative2433437 - 243465443830.9
alpha,alpha-trehalose-phosphate synthase (udp-forming)HALXA_RS11800Not AvailablePositive2434962 - 243660861823.6
trehalose-phosphataseHALXA_RS11805Not AvailablePositive2436650 - 243746228697.5

Displaying genes 2541 – 2550 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.