Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipid ii:glycine glycyltransferase femxHALXA_RS11720Not AvailablePositive2413566 - 241457638181.7
duf6498-containing proteinHALXA_RS11725Not AvailableNegative2414607 - 241589046068.7
helix-turn-helix domain-containing proteinHALXA_RS11730Not AvailableNegative2415968 - 241625810455.0
phosphoglucosamine mutaseHALXA_RS11735Not AvailablePositive2416486 - 241782947141.5
hypothetical proteinHALXA_RS11740Not AvailableNegative2417970 - 24181797837.09
bifunctional sugar-1-phosphate nucleotidylyltransferase/acetyltransferaseHALXA_RS11745Not AvailablePositive2418567 - 241974841409.4
glutamine--fructose-6-phosphate transaminase (isomerizing)HALXA_RS11750Not AvailableNegative2420250 - 242206164653.8
cation:proton antiporterHALXA_RS11755Not AvailablePositive2422862 - 242491973638.8
duf5786 family proteinHALXA_RS11760Not AvailablePositive2425019 - 24252076872.25
helix-turn-helix domain-containing proteinHALXA_RS11765Not AvailableNegative2425433 - 242622429083.6

Displaying genes 2531 – 2540 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.