Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcription initiation factor iibHALXA_RS11680Not AvailablePositive2403430 - 240439235781.9
hypothetical proteinHALXA_RS22120Not AvailableNegative2404385 - 24045616726.7
hypothetical proteinHALXA_RS22125Not AvailablePositive2404796 - 240518813727.0
dead/deah box helicaseHALXA_RS11690Not AvailablePositive2405300 - 240726474042.3
hypothetical proteinHALXA_RS11695Not AvailableNegative2407261 - 240761412265.4
hypothetical proteinHALXA_RS11700Not AvailableNegative2407847 - 24080446644.11
helicase hera domain-containing proteinHALXA_RS11705Not AvailablePositive2408255 - 241024073338.6
hypothetical proteinHALXA_RS22130Not AvailableNegative2410237 - 24104045536.99
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeHALXA_RS11710Not AvailableNegative2410483 - 241171844798.2
alkaline phosphatase family proteinHALXA_RS11715Not AvailablePositive2411938 - 241356960222.9

Displaying genes 2521 – 2530 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.