Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gfo/idh/moca family proteinHALXA_RS11580Not AvailablePositive2376120 - 237717839143.2
nucleotide sugar dehydrogenaseHALXA_RS11585Not AvailablePositive2377175 - 237869252806.8
glycosyltransferase family 2 proteinHALXA_RS11590Not AvailablePositive2378685 - 237980340447.1
hypothetical proteinHALXA_RS11595Not AvailableNegative2379862 - 23800897757.56
glycosyltransferaseHALXA_RS11600Not AvailablePositive2380272 - 238120134008.9
hypothetical proteinHALXA_RS11605Not AvailableNegative2381355 - 238280354509.2
hypothetical proteinHALXA_RS11610Not AvailableNegative2383185 - 23833706798.34
zinc-dependent alcohol dehydrogenaseHALXA_RS11615Not AvailablePositive2383558 - 238472742441.0
nad-dependent epimerase/dehydratase family proteinHALXA_RS11620Not AvailableNegative2385458 - 238646235709.4
duf362 domain-containing proteinHALXA_RS11625Not AvailableNegative2386465 - 238742133228.4

Displaying genes 2501 – 2510 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.