Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix transcriptional regulatorHALXA_RS11535Not AvailablePositive2364967 - 236547618227.7
hypothetical proteinHALXA_RS22370Not AvailablePositive2365657 - 2368659107258.0
helix-turn-helix transcriptional regulatorHALXA_RS11545Not AvailableNegative2368795 - 236929817932.2
hypothetical proteinHALXA_RS22115Not AvailableNegative2369752 - 23699225987.86
winged helix-turn-helix domain-containing proteinHALXA_RS11550Not AvailablePositive2370560 - 237089211849.6
padr family transcriptional regulatorHALXA_RS11555Not AvailablePositive2371198 - 237147310742.5
duf1616 domain-containing proteinHALXA_RS11560Not AvailablePositive2371829 - 237282734681.3
hypothetical proteinHALXA_RS11565Not AvailableNegative2373226 - 237377420241.8
acyltransferaseHALXA_RS11570Not AvailablePositive2374295 - 237490020547.6
degt/dnrj/eryc1/strs family aminotransferaseHALXA_RS11575Not AvailablePositive2374897 - 237612344009.1

Displaying genes 2491 – 2500 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.