Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix domain-containing proteinHALXA_RS00585Not AvailableNegative113677 - 11438725807.2
competence/damage-inducible protein aHALXA_RS00590Not AvailableNegative114525 - 11530428292.6
abc transporter substrate-binding proteinHALXA_RS00595Not AvailablePositive115568 - 11674343650.0
abc transporter atp-binding proteinHALXA_RS00600Not AvailablePositive116767 - 11790341303.8
abc transporter permeaseHALXA_RS00605Not AvailablePositive117906 - 11885333107.0
abc transporter permeaseHALXA_RS00610Not AvailablePositive118846 - 11965529174.1
eama family transporterHALXA_RS00615Not AvailableNegative119752 - 12016513556.8
beta-casp ribonuclease acpsf1HALXA_RS00620Not AvailableNegative120465 - 12239971802.3
hypothetical proteinHALXA_RS00625Not AvailablePositive122786 - 12327117913.7
hypothetical proteinHALXA_RS00630Not AvailableNegative123316 - 12390320683.8

Displaying genes 241 – 250 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.