Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tyrosine-type recombinase/integraseHALXA_RS11435Not AvailablePositive2345827 - 234699943366.2
na(+)/h(+) antiporter subunit dHALXA_RS11440Not AvailableNegative2347113 - 234898466512.7
proton-conducting transporter membrane subunitHALXA_RS11445Not AvailableNegative2348984 - 235091868820.7
proton-conducting transporter membrane subunitHALXA_RS11450Not AvailableNegative2350918 - 235249854340.7
cation:proton antiporter subunit cHALXA_RS11455Not AvailableNegative2352491 - 235284712633.9
mnhb domain-containing proteinHALXA_RS11460Not AvailableNegative2352852 - 235340619223.9
duf4040 domain-containing proteinHALXA_RS11465Not AvailableNegative2353406 - 235394518962.4
monovalent cation/h(+) antiporter subunit gHALXA_RS11470Not AvailableNegative2353942 - 235439415415.1
cation:proton antiporterHALXA_RS11475Not AvailableNegative2354391 - 235468710194.8
monovalent cation/h+ antiporter subunit eHALXA_RS11480Not AvailableNegative2354684 - 235574838728.0

Displaying genes 2471 – 2480 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.