Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyltransferaseHALXA_RS11385Not AvailablePositive2330959 - 233219744854.4
gnat family n-acetyltransferaseHALXA_RS11390Not AvailablePositive2332408 - 233342738318.9
hypothetical proteinHALXA_RS11395Not AvailableNegative2333501 - 233548669281.2
flippaseHALXA_RS11400Not AvailableNegative2335807 - 233734253971.2
hypothetical proteinHALXA_RS11405Not AvailableNegative2337676 - 233950265778.8
duf1616 domain-containing proteinHALXA_RS11410Not AvailableNegative2339902 - 234094536786.0
gnat family n-acetyltransferaseHALXA_RS11415Not AvailablePositive2341337 - 234234438556.2
rdd family proteinHALXA_RS11420Not AvailableNegative2342437 - 234288015457.3
alkaline phosphatase family proteinHALXA_RS11425Not AvailablePositive2343060 - 234467358630.5
zip family metal transporterHALXA_RS11430Not AvailablePositive2344789 - 234558627723.5

Displaying genes 2461 – 2470 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.