Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS22490Not AvailablePositive2321389 - 232197321012.1
universal stress proteinHALXA_RS11340Not AvailableNegative2321992 - 232236912801.7
hypothetical proteinHALXA_RS11345Not AvailableNegative2322747 - 232305511307.1
arsr/smtb family transcription factorHALXA_RS11350Not AvailableNegative2323052 - 232339913141.1
metal-dependent hydrolaseHALXA_RS11355Not AvailablePositive2323654 - 232428322777.6
polysaccharide deacetylase family proteinHALXA_RS11360Not AvailablePositive2324629 - 232573241011.4
pgf-pre-pgf domain-containing proteinHALXA_RS11365Not AvailablePositive2325729 - 232708448073.4
hypothetical proteinHALXA_RS11370Not AvailableNegative2327151 - 232814337072.5
duf354 domain-containing proteinHALXA_RS11375Not AvailableNegative2328378 - 232949641177.7
hypothetical proteinHALXA_RS11380Not AvailablePositive2329661 - 233096249793.9

Displaying genes 2451 – 2460 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.