Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chorismate mutaseHALXA_RS11295Not AvailablePositive2314372 - 231475214416.4
winged helix-turn-helix transcriptional regulatorHALXA_RS21065Not AvailableNegative2315057 - 231541613462.7
nad(p)-binding domain-containing proteinHALXA_RS21070Not AvailablePositive2315634 - 231642228201.6
type ii toxin-antitoxin system vapc family toxinHALXA_RS11300Not AvailableNegative2316757 - 231714914744.7
antitoxin vapb family proteinHALXA_RS11305Not AvailableNegative2317146 - 23174069604.96
s1c family serine proteaseHALXA_RS11310Not AvailableNegative2317550 - 231835327865.6
hypothetical proteinHALXA_RS11315Not AvailableNegative2318576 - 231912119137.2
hypothetical proteinHALXA_RS11320Not AvailableNegative2319149 - 23193618099.29
helix-turn-helix transcriptional regulatorHALXA_RS11325Not AvailableNegative2319551 - 232036030163.5
hypothetical proteinHALXA_RS11330Not AvailableNegative2320427 - 232124231383.3

Displaying genes 2441 – 2450 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.